C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000FW_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000149488-ENSG00000101361 | CGP | 9606 | 20:2536607-2658393  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000101361  (NOP56)NOP56 ribonucleoprotein |
ENST00000329276 (NOP56-009)
|
2652145-2658393 | protein_coding | |
|
ENST00000415272 (NOP56-010)
|
2655616-2658359 | protein_coding | ||
|
ENST00000445139 (NOP56-016)
|
2652649-2655512 | protein_coding | ||
|
ENST00000460258 (NOP56-015)
|
2653001-2655512 | processed_transcript | ||
|
ENST00000462630 (NOP56-005)
|
2656640-2658393 | processed_transcript | ||
|
ENST00000466447 (NOP56-006)
|
2656111-2658393 | processed_transcript | ||
|
ENST00000467196 (NOP56-007)
|
2655436-2658393 | nonsense_mediated_decay | ||
|
ENST00000467857 (NOP56-008)
|
2656949-2658393 | processed_transcript | ||
|
ENST00000469588 (NOP56-002)
|
2652646-2655512 | processed_transcript | ||
|
ENST00000470143 (NOP56-014)
|
2652633-2653820 | processed_transcript | ||
|
ENST00000471023 (NOP56-018)
|
2656410-2657225 | processed_transcript | ||
|
ENST00000480447 (NOP56-004)
|
2656159-2657218 | processed_transcript | ||
|
ENST00000480992 (NOP56-003)
|
2654789-2656549 | processed_transcript | ||
|
ENST00000484998 (NOP56-017)
|
2655097-2656549 | processed_transcript | ||
|
ENST00000490753 (NOP56-001)
|
2656401-2657449 | processed_transcript | ||
|
ENST00000492135 (NOP56-011)
|
2655946-2658393 | processed_transcript | ||
|
ENST00000494697 (NOP56-012)
|
2652632-2655512 | processed_transcript | ||
|
ENST00000496775 (NOP56-013)
|
2654234-2655512 | processed_transcript | ||
|
ENST00000612233 (NOP56-019)
|
2655413-2658392 | retained_intron | ||
|
ENST00000616692 (NOP56-020)
|
2655547-2658393 | retained_intron | ||
|
ENSG00000149488 (TMC2) transmembrane channel-like 2 |
ENST00000358864 (TMC2-001)
|
2536607-2641784 | protein_coding | |
|
ENST00000496948 (TMC2-002)
|
2602166-2618379 | processed_transcript | ||
| CIL_0000FW_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000060332-ENSMUSG00000027405 | CGP | 10090 | 2:130195194-130279313 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000027406 (Idh3b) isocitrate dehydrogenase 3 (NAD+) beta |
ENSMUST00000028892 (Idh3b-001)
|
130279309-130284547 | protein_coding | |
|
ENSMUST00000124868 (Idh3b-003)
|
130283663-130284415 | retained_intron | ||
|
ENSMUST00000149843 (Idh3b-002)
|
130282145-130284434 | retained_intron | ||
|
ENSMUST00000184538 (Idh3b-004)
|
130279313-130280551 | nonsense_mediated_decay | ||
|
ENSMUSG00000060332 (Tmc2) transmembrane channel-like gene family 2 |
ENSMUST00000077988 (Tmc2-001)
|
130195194-130264445 | protein_coding | |
|
ENSMUST00000166774 (Tmc2-201)
|
130196543-130264217 | protein_coding | ||
Expression Patterns
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