C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136642 Galnt13-004 ENSMUSG00000060988 10090 + 2:54436491-54733133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLungOvaryTestisENSMUST00000136642
Transcript ID Bladder Breast Colon Lung Ovary Testis
ENSMUST00000136642 0.037±0.00 0.050±0.00 0.103±0.00 0.593±0.15 0.207±0.13 0.033±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075A CIL_00075A_0002 CGP 2:54084093-55118309
CIL_00075B CIL_00075B_0002 CGP 2:54436317-55598145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004653 IDA polypeptide N-acetylgalactosaminyltransferase activity
GO:0006493 IDA protein O-linked glycosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392825 GALNT13-001 protein_coding Homo_sapiens 0 440
ENST00000409237 GALNT13-005 protein_coding Homo_sapiens 0 409
ENST00000434213 GALNT13-002 protein_coding Homo_sapiens 2e-26 122

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