C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM homeobox protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136821 Lhx6-008 ENSMUSG00000026890 10090 - 2:36083684-36094273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverLungMuscleOvaryTestisENSMUST00000136821
Transcript ID Adrenal Breast Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000136821 0.752±0.29 1.023±0.15 0.304±0.10 0.359±0.19 0.575±0.02 0.506±0.00 0.630±0.18 1.028±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006N7 CIL_0006N7_0002 CGP 2:36049458-36105408
CIL_0006N8 CIL_0006N8_0002 CGP 2:36081953-36136773

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340587 LHX6-006 protein_coding Homo_sapiens 0 861
ENST00000373754 LHX6-003 protein_coding Homo_sapiens 0 861
ENST00000373755 LHX6-002 protein_coding Homo_sapiens 0 630
ENST00000394319 LHX6-001 protein_coding Homo_sapiens 0 630
ENST00000464484 LHX6-005 protein_coding Homo_sapiens 0 488
ENST00000482062 LHX6-004 protein_coding Homo_sapiens 0 239
ENST00000541397 LHX6-009 protein_coding Homo_sapiens 0 861
ENST00000559895 LHX6-008 protein_coding Homo_sapiens 0 630

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