C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006N7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185681-ENSG00000106852 CGP 9606 9:122159908-122229626
GeneTranscriptPositionBiotype
ENSG00000106852 (LHX6)
LIM homeobox 6 		ENST00000340587 (LHX6-006) 122202579-122228941 protein_coding
ENST00000373754 (LHX6-003) 122202579-122227586 protein_coding
ENST00000373755 (LHX6-002) 122202577-122227586 protein_coding
ENST00000394319 (LHX6-001) 122202579-122228845 protein_coding
ENST00000464484 (LHX6-005) 122204432-122213922 protein_coding
ENST00000482062 (LHX6-004) 122204255-122213893 protein_coding
ENST00000541397 (LHX6-009) 122202931-122228428 protein_coding
ENST00000558672 (LHX6-007) 122217083-122226761 retained_intron
ENST00000559529 (LHX6-010) 122227416-122229626 processed_transcript
ENST00000559895 (LHX6-008) 122202583-122221740 protein_coding
ENST00000560152 (LHX6-012) 122217105-122227123 retained_intron
ENST00000560485 (LHX6-011) 122226999-122228431 protein_coding
ENSG00000185681 (MORN5)
MORN repeat containing 5 		ENST00000373764 (MORN5-001) 122159911-122200088 protein_coding
ENST00000418632 (MORN5-002) 122164615-122174568 protein_coding
ENST00000477017 (MORN5-004) 122169661-122174754 processed_transcript
ENST00000486801 (MORN5-003) 122166768-122200083 processed_transcript
ENST00000536616 (MORN5-201) 122159908-122200088 protein_coding
CIL_0006N7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026894-ENSMUSG00000026890 CGP 10090 2:36049458-36105408
GeneTranscriptPositionBiotype
ENSMUSG00000026890 (Lhx6)
LIM homeobox protein 6 		ENSMUST00000112960 (Lhx6-003) 36081953-36105271 protein_coding
ENSMUST00000112961 (Lhx6-001) 36081953-36104060 protein_coding
ENSMUST00000112963 (Lhx6-201) 36081954-36105408 protein_coding
ENSMUST00000112966 (Lhx6-002) 36081953-36104060 protein_coding
ENSMUST00000112967 (Lhx6-007) 36081953-36105408 protein_coding
ENSMUST00000136821 (Lhx6-008) 36083684-36094273 protein_coding
ENSMUST00000137436 (Lhx6-004) 36101323-36105255 processed_transcript
ENSMUST00000148852 (Lhx6-006) 36083687-36104891 protein_coding
ENSMUST00000187180 (Lhx6-005) 36094225-36103592 retained_intron
ENSMUSG00000026894 (Morn5)
MORN repeat containing 5 		ENSMUST00000028256 (Morn5-001) 36049458-36079718 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006N7_0001ENSG00000106852ENST00000340587ENST00000373754ENST00000373755ENST00000394319ENST00000464484ENST00000482062ENST00000541397ENST00000558672ENST00000559529ENST00000559895ENST00000560152ENST00000560485ENSG00000185681ENST00000373764ENST00000418632ENST00000477017ENST00000486801ENST00000536616CIL_0006N7_0002ENSMUSG00000026890ENSMUST00000112960ENSMUST00000112961ENSMUST00000112963ENSMUST00000112966ENSMUST00000112967ENSMUST00000136821ENSMUST00000137436ENSMUST00000148852ENSMUST00000187180ENSMUSG00000026894ENSMUST00000028256
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006N7_0001ENSG00000106852ENST00000340587ENST00000373754ENST00000373755ENST00000394319ENST00000541397ENST00000559895ENST00000560152ENSG00000185681ENST00000373764ENST00000418632ENST00000477017ENST00000486801ENST00000536616CIL_0006N7_0002ENSMUSG00000026890ENSMUST00000112960ENSMUST00000112961ENSMUST00000112963ENSMUST00000112966ENSMUST00000112967ENSMUST00000136821ENSMUST00000137436ENSMUST00000148852ENSMUSG00000026894ENSMUST00000028256
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106852 ENST00000340587 1.931±0.00 0.638±0.00 N/A 0.795±0.00 0.839±0.00 N/A 0.240±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000373754 N/A N/A 0.038±0.00 1.449±0.00 N/A N/A 0.174±0.00 0.528±0.00 0.049±0.00 N/A 0.655±0.00 0.718±0.00 0.343±0.00 N/A
ENST00000373755 N/A N/A N/A 1.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394319 4.556±0.00 1.778±0.00 N/A N/A 0.501±0.00 2.448±0.00 1.053±0.00 N/A N/A N/A 0.080±0.00 0.952±0.24 N/A 0.998±0.00
ENST00000464484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541397 4.050±0.00 2.522±0.00 N/A 0.846±0.00 1.057±0.00 1.716±1.65 0.217±0.00 0.306±0.00 N/A 0.103±0.00 0.118±0.00 0.314±0.03 0.448±0.12 1.332±0.35
ENST00000558672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559895 N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000560152 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.248±0.00 0.244±0.00 N/A N/A N/A
ENST00000560485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185681 ENST00000373764 N/A N/A N/A 0.204±0.07 N/A N/A N/A N/A 0.360±0.00 4.543±3.41 N/A 3.179±2.99 N/A 47.621±14.95
ENST00000418632 0.139±0.00 N/A N/A 0.360±0.00 N/A 8.218±0.00 N/A N/A N/A N/A N/A 0.378±0.00 N/A N/A
ENST00000477017 N/A 0.092±0.00 N/A N/A N/A 2.702±0.00 N/A 0.093±0.00 N/A N/A N/A 0.412±0.00 N/A N/A
ENST00000486801 N/A N/A N/A 1.430±0.00 0.132±0.00 0.452±0.00 N/A N/A N/A 5.225±0.00 N/A 1.217±0.00 0.189±0.11 N/A
ENST00000536616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.541±1.68 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026890 ENSMUST00000112960 1.312±0.43 0.336±0.14 0.189±0.00 1.664±0.55 0.754±0.26 0.214±0.09 0.389±0.05 0.180±0.08 0.178±0.13 N/A N/A 0.434±0.14 0.741±0.20 N/A
ENSMUST00000112961 N/A N/A N/A 1.776±0.13 N/A 0.088±0.00 N/A 0.147±0.05 0.125±0.01 0.183±0.09 N/A 0.269±0.09 0.903±0.00 0.586±0.00
ENSMUST00000112963 0.282±0.00 0.300±0.04 N/A N/A 0.660±0.38 N/A N/A N/A N/A 0.332±0.17 N/A 0.350±0.09 N/A 0.138±0.00
ENSMUST00000112966 1.266±0.00 N/A N/A 2.308±0.93 0.277±0.03 0.135±0.02 0.322±0.16 0.127±0.08 0.102±0.04 N/A 0.465±0.00 0.327±0.13 1.445±1.06 0.179±0.00
ENSMUST00000112967 0.594±0.21 0.281±0.17 0.143±0.00 N/A 0.246±0.06 0.198±0.14 0.376±0.12 N/A 0.143±0.08 0.240±0.00 N/A 0.366±0.09 0.291±0.00 N/A
ENSMUST00000136821 N/A 0.752±0.29 N/A N/A 1.023±0.15 N/A N/A 0.304±0.10 0.359±0.19 0.575±0.02 0.506±0.00 0.630±0.18 N/A 1.028±0.25
ENSMUST00000137436 N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148852 0.525±0.00 0.253±0.00 N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 N/A 0.487±0.00 N/A N/A
ENSMUST00000187180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026894 ENSMUST00000028256 0.384±0.24 0.286±0.23 0.108±0.01 0.494±0.16 0.185±0.08 0.191±0.00 0.247±0.16 0.604±0.32 0.054±0.03 2.169±0.22 0.101±0.00 3.234±1.11 0.117±0.07 216.126±59.73

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