| Transcript ID | Colon | Lung | Ovary |
|---|---|---|---|
| ENSMUST00000136980 | 1.226±0.00 | 2.133±0.00 | 5.496±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | PRP40 pre-mRNA processing factor 40 homolog B (yeast) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000136980  |
Prpf40b-011 |
ENSMUSG00000023007 |
10090 | + |
15:99295895-99317010  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
| GO:0005575 | ND | cellular_component |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000261897
|
PRPF40B-002 | protein_coding | Homo_sapiens | 0 | 3973 |
|
ENST00000335154
|
FMNL3-002 | protein_coding | Homo_sapiens | 0 | 603 |
|
ENST00000380281
|
PRPF40B-001 | protein_coding | Homo_sapiens | 0 | 3855 |
|
ENST00000546626
|
PRPF40B-014 | retained_intron | Homo_sapiens | 0 | 353 |
|
ENST00000548399
|
PRPF40B-012 | retained_intron | Homo_sapiens | 0 | 278 |
|
ENST00000548436
|
PRPF40B-009 | retained_intron | Homo_sapiens | 0 | 789 |
|
ENST00000548825
|
PRPF40B-019 | protein_coding | Homo_sapiens | 0 | 3834 |
|
ENST00000549547
|
PRPF40B-016 | nonsense_mediated_decay | Homo_sapiens | 0 | 595 |
|
ENST00000551111
|
PRPF40B-011 | retained_intron | Homo_sapiens | 0 | 542 |
|
ENST00000551269
|
PRPF40B-017 | retained_intron | Homo_sapiens | 0 | 250 |
|
ENST00000551418
|
PRPF40B-010 | retained_intron | Homo_sapiens | 0 | 298 |
