C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proprotein convertase subtilisin/kexin type 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137177 Pcsk4-004 ENSMUSG00000020131 10090 - 10:80321283-80329453 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000137177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000137177 0.380±0.00 0.612±0.05 0.476±0.00 0.271±0.10 1.389±0.00 1.542±0.34 0.944±0.42 1.427±0.54 1.053±0.19 0.196±0.02 1.133±0.30 0.799±0.42 41.855±5.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZH CIL_0000ZH_0002 CGP 10:80318254-80329498
CIL_00066P CIL_00066P_0002 CGP 10:80321283-80336441

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300954 PCSK4-001 protein_coding Homo_sapiens 0 1086
ENST00000441747 PCSK4-003 retained_intron Homo_sapiens 0 824
ENST00000586616 PCSK4-002 retained_intron Homo_sapiens 3.00018e-42 178
ENST00000588195 PCSK4-006 retained_intron Homo_sapiens 0 878
ENST00000591201 PCSK4-004 nonsense_mediated_decay Homo_sapiens 0 782
ENST00000591303 PCSK4-012 retained_intron Homo_sapiens 0 339

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