C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatase and actin regulator 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137434 Phactr1-010 ENSMUSG00000054728 10090 + 13:43112133-43135383 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000137434
Transcript ID Placenta
ENSMUST00000137434 51.504±9.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IC CIL_0003IC_0002 CGP 13:42301270-43138526
CIL_0001BV CIL_0001BV_0003 CGP 13:42680623-43171501

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332995 PHACTR1-005 protein_coding Homo_sapiens 0 593
ENST00000379329 PHACTR1-004 protein_coding Homo_sapiens 0 350
ENST00000379335 PHACTR1-003 protein_coding Homo_sapiens 0 593
ENST00000379350 PHACTR1-001 protein_coding Homo_sapiens 1e-17 97
ENST00000415087 PHACTR1-201 protein_coding Homo_sapiens 0 593
ENST00000489548 PHACTR1-009 processed_transcript Homo_sapiens 0 403

Loading