C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM homeobox protein 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137436 Lhx6-004 ENSMUSG00000026890 10090 - 2:36101323-36105255 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENSMUST00000137436
Transcript ID Colon
ENSMUST00000137436 0.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006N7 CIL_0006N7_0002 CGP 2:36049458-36105408
CIL_0006N8 CIL_0006N8_0002 CGP 2:36081953-36136773

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340587 LHX6-006 protein_coding Homo_sapiens 0 715
ENST00000373754 LHX6-003 protein_coding Homo_sapiens 0 571
ENST00000373755 LHX6-002 protein_coding Homo_sapiens 0 571
ENST00000394319 LHX6-001 protein_coding Homo_sapiens 0 715
ENST00000541397 LHX6-009 protein_coding Homo_sapiens 0 566
ENST00000558672 LHX6-007 retained_intron Homo_sapiens 0 213
ENST00000559529 LHX6-010 processed_transcript Homo_sapiens 4e-24 115
ENST00000560152 LHX6-012 retained_intron Homo_sapiens 0 449
ENST00000560485 LHX6-011 protein_coding Homo_sapiens 3e-37 159

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