C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137634 Ppp1r1b-006 ENSMUSG00000061718 10090 + 11:98349996-98357794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastMuscleOvaryENSMUST00000137634
Transcript ID Adipose Breast Muscle Ovary
ENSMUST00000137634 0.286±0.08 0.504±0.15 0.168±0.00 2.303±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_00080Z CIL_00080Z_0002 VISTA 11:98039002-98639485
CIL_00098W CIL_00098W_0002 VISTA 11:98077499-98680383
CIL_0007WH CIL_0007WH_0002 VISTA 11:98091902-98695006
CIL_00061T CIL_00061T_0002 CGP 11:98325415-98357796
CIL_0000TI CIL_0000TI_0003 CGP 11:98348404-98381112

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001975 IGI response to amphetamine
GO:0004864 TAS protein phosphatase inhibitor activity
GO:0004865 TAS protein serine/threonine phosphatase inhibitor activity
GO:0005634 IDA nucleus
GO:0005737 TAS cytoplasm
GO:0006351 IMP transcription, DNA-templated
GO:0007621 IDA negative regulation of female receptivity
GO:0008542 IGI visual learning
GO:0043025 IDA neuronal cell body
GO:0043086 IEA negative regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254079 PPP1R1B-001 protein_coding Homo_sapiens 0 728
ENST00000394265 PPP1R1B-005 protein_coding Homo_sapiens 0 732
ENST00000394267 PPP1R1B-002 protein_coding Homo_sapiens 0 732
ENST00000580772 PPP1R1B-011 retained_intron Homo_sapiens 0 200
ENST00000580825 PPP1R1B-013 protein_coding Homo_sapiens 0 521
ENST00000582680 PPP1R1B-014 protein_coding Homo_sapiens 0 302
ENST00000583446 PPP1R1B-012 retained_intron Homo_sapiens 0 324

Loading