C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptonemal complex protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138175 Sycp2-003 ENSMUSG00000060445 10090 - 2:178395265-178407422 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeENSMUST00000138175
Transcript ID Adipose
ENSMUST00000138175 0.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SC CIL_0001SC_0002 CGP 2:178118975-178407685

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000795 IDA synaptonemal complex
GO:0000800 IDA lateral element
GO:0005515 IPI protein binding
GO:0007140 IMP male meiosis
GO:0007143 IMP female meiotic division
GO:0009566 IMP fertilization
GO:0009887 IMP organ morphogenesis
GO:0043066 IMP negative regulation of apoptotic process
GO:0046982 IPI protein heterodimerization activity
GO:0048808 IMP male genitalia morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357552 SYCP2-001 protein_coding Homo_sapiens 0 599
ENST00000371001 SYCP2-201 protein_coding Homo_sapiens 0 599
ENST00000425931 SYCP2-003 protein_coding Homo_sapiens 0 370
ENST00000446834 SYCP2-002 protein_coding Homo_sapiens 0 599
ENST00000476314 SYCP2-004 processed_transcript Homo_sapiens 0 403

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