C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptonemal complex protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371001 SYCP2-201 ENSG00000196074 9606 - 20:59863564-59932154 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonOvaryPlacentaTestisENST00000371001
Transcript ID Adipose Breast Colon Ovary Placenta Testis
ENST00000371001 0.144±0.00 0.223±0.00 0.085±0.00 0.052±0.00 0.211±0.00 1.776±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SC CIL_0001SC_0001 CGP 20:59577509-59933655

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000795 NAS synaptonemal complex
GO:0003677 NAS DNA binding
GO:0005634 NAS nucleus
GO:0007130 NAS synaptonemal complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081134 Sycp2-001 protein_coding Mus_musculus 0 2625
ENSMUST00000138175 Sycp2-003 protein_coding Mus_musculus 0 599

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