C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Nedd4 family interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138283 Ndfip2-003 ENSMUSG00000053253 10090 + 14:105258753-105308871 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000138283
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000138283 17.388±3.50 35.786±6.14 8.077±0.10 16.084±1.81 17.416±5.32 69.498±9.50 7.063±1.18 41.972±6.69 19.163±9.37 27.289±3.80 1.506±0.38 28.568±8.67 7.943±5.31 12.795±7.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083L CIL_00083L_0002 VISTA 14:105076563-105679035
CIL_0002EH CIL_0002EH_0002 CGP 14:105106751-105309298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005768 IEA endosome
GO:0016021 ISM integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218652 NDFIP2-001 protein_coding Homo_sapiens 0 909
ENST00000465762 NDFIP2-002 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000487865 NDFIP2-004 protein_coding Homo_sapiens 0 331
ENST00000612570 NDFIP2-201 protein_coding Homo_sapiens 0 909
ENST00000620924 NDFIP2-005 protein_coding Homo_sapiens 0 830

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