C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002EH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139746-ENSG00000102471 CGP 9606 13:79311824-79556075
GeneTranscriptPositionBiotype
ENSG00000102471 (NDFIP2)
Nedd4 family interacting protein 2 		ENST00000218652 (NDFIP2-001) 79481152-79556075 protein_coding
ENST00000465762 (NDFIP2-002) 79481457-79552578 nonsense_mediated_decay
ENST00000487865 (NDFIP2-004) 79481453-79553195 protein_coding
ENST00000494647 (NDFIP2-003) 79518992-79520975 processed_transcript
ENST00000612570 (NDFIP2-201) 79481124-79556070 protein_coding
ENST00000620924 (NDFIP2-005) 79481474-79554096 protein_coding
ENSG00000139746 (RBM26)
RNA binding motif protein 26 		ENST00000267229 (RBM26-002) 79319954-79405788 protein_coding
ENST00000438724 (RBM26-201) 79318868-79406221 protein_coding
ENST00000438737 (RBM26-004) 79319954-79406215 protein_coding
ENST00000449987 (RBM26-006) 79311824-79341212 protein_coding
ENST00000461008 (RBM26-003) 79365760-79366710 processed_transcript
ENST00000472143 (RBM26-005) 79376217-79406477 retained_intron
ENST00000622611 (RBM26-202) 79318868-79406221 protein_coding
ENSG00000252496 (RNA5SP33)
RNA, 5S ribosomal pseudogene 33 		ENST00000516687 (RNA5SP33-201) 79389534-79389631 rRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0002EH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022119-ENSMUSG00000053253 CGP 10090 14:105106751-105309298
GeneTranscriptPositionBiotype
ENSMUSG00000022119 (Rbm26)
RNA binding motif protein 26 		ENSMUST00000022715 (Rbm26-007) 105115063-105177327 protein_coding
ENSMUST00000100327 (Rbm26-001) 105114986-105177323 protein_coding
ENSMUST00000163499 (Rbm26-002) 105116135-105177264 protein_coding
ENSMUST00000163545 (Rbm26-006) 105114965-105176860 protein_coding
ENSMUST00000172122 (Rbm26-004) 105106751-105130337 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002EH_0001ENSG00000102471ENST00000218652ENST00000465762ENST00000487865ENST00000494647ENST00000612570ENST00000620924ENSG00000139746ENST00000267229ENST00000438724ENST00000438737ENST00000449987ENST00000461008ENST00000472143ENST00000622611ENSG00000252496ENST00000516687CIL_0002EH_0002ENSMUSG00000022119ENSMUST00000022715ENSMUST00000100327ENSMUST00000163499ENSMUST00000163545ENSMUST00000172122
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002EH_0001ENSG00000102471ENST00000218652ENST00000487865ENST00000612570ENST00000620924ENSG00000139746ENST00000267229ENST00000438724ENST00000438737ENST00000449987ENST00000622611ENSG00000252496ENST00000516687CIL_0002EH_0002ENSMUSG00000022119ENSMUST00000022715ENSMUST00000100327ENSMUST00000163499ENSMUST00000163545ENSMUST00000172122
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102471 ENST00000218652 1.918±0.00 1.446±0.00 N/A 17.445±0.00 1.921±0.12 2.680±1.57 1.522±0.48 3.466±1.00 2.231±0.32 1.881±0.90 0.856±0.76 4.895±1.55 3.065±0.80 2.568±0.00
ENST00000465762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487865 2.647±0.00 N/A 3.154±0.00 N/A 2.582±0.02 2.099±0.00 2.721±1.62 3.236±0.00 2.404±0.00 3.588±0.00 1.415±0.01 5.284±3.64 7.773±1.29 8.110±2.19
ENST00000494647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612570 N/A N/A N/A 14.925±11.02 N/A N/A N/A N/A N/A N/A 0.090±0.00 1.373±0.00 N/A 1.448±0.00
ENST00000620924 1.080±0.00 0.809±0.00 N/A N/A 1.071±0.00 2.561±0.06 1.832±0.60 6.571±2.84 2.059±0.15 2.651±0.60 0.795±0.47 6.675±5.12 5.833±0.78 2.367±0.96
ENSG00000139746 ENST00000267229 2.219±0.00 N/A 2.572±0.00 4.245±0.00 4.076±0.00 3.572±0.88 1.223±0.00 1.610±0.69 3.196±0.00 5.392±0.00 0.800±0.00 3.861±0.81 2.451±1.63 7.711±3.41
ENST00000438724 1.528±0.00 4.959±0.00 N/A 1.341±0.00 3.350±1.42 N/A 1.655±0.00 1.918±1.07 1.181±0.00 2.806±0.29 N/A 2.897±0.13 1.164±0.47 2.477±0.21
ENST00000438737 2.321±0.00 N/A N/A 4.002±0.00 N/A 4.266±0.00 1.005±0.37 N/A 2.113±0.00 N/A 1.717±0.00 4.654±0.00 0.569±0.00 N/A
ENST00000449987 1.750±0.00 7.020±0.00 N/A 3.210±0.00 3.819±1.06 N/A N/A 3.322±0.00 1.272±0.00 2.585±0.52 1.638±0.00 3.699±0.41 0.657±0.00 7.943±0.00
ENST00000461008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622611 N/A N/A N/A 1.870±0.00 1.140±0.00 N/A N/A 1.273±0.00 0.360±0.00 1.134±0.00 0.970±0.00 1.412±0.00 N/A N/A
ENSG00000252496 ENST00000516687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.349±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022119 ENSMUST00000022715 3.586±2.52 3.357±1.16 N/A 5.637±0.65 2.496±1.09 2.545±0.66 1.516±0.16 1.242±0.09 1.694±0.37 3.689±1.46 1.050±0.12 8.033±3.80 10.229±0.00 14.102±8.61
ENSMUST00000100327 1.805±1.15 8.333±2.71 N/A N/A 4.887±2.18 4.043±1.93 0.711±0.00 1.632±0.32 1.257±0.67 1.714±0.46 N/A 10.183±1.89 4.819±1.32 2.839±0.21
ENSMUST00000163499 0.776±0.00 N/A N/A N/A N/A N/A N/A 0.781±0.00 N/A 1.003±0.02 N/A N/A 1.761±0.41 N/A
ENSMUST00000163545 N/A 2.862±0.07 N/A 2.245±0.00 2.102±0.43 1.529±0.00 1.177±0.00 N/A N/A 2.004±0.00 N/A 3.709±1.24 3.331±0.00 N/A
ENSMUST00000172122 N/A N/A 4.374±0.87 7.718±4.49 N/A N/A N/A N/A 4.856±1.69 2.836±0.15 1.349±0.28 2.591±0.00 4.281±2.75 N/A

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