C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Nedd4 family interacting protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487865 NDFIP2-004 ENSG00000102471 9606 + 13:79481453-79553195 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000487865
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000487865 2.647±0.00 3.154±0.00 2.582±0.02 2.099±0.00 2.721±1.62 3.236±0.00 2.404±0.00 3.588±0.00 1.415±0.01 5.284±3.64 7.773±1.29 8.110±2.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EH CIL_0002EH_0001 CGP 13:79311824-79556075
CIL_00083L CIL_00083L_0001 VISTA 13:79358111-79960495

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149358 Ndfip2-006 processed_transcript Mus_musculus 0 621
ENSMUST00000181969 Ndfip2-001 protein_coding Mus_musculus 0 621
ENSMUST00000127286 Ndfip2-004 retained_intron Mus_musculus 0 331
ENSMUST00000138283 Ndfip2-003 protein_coding Mus_musculus 0 331
ENSMUST00000149781 Ndfip2-005 retained_intron Mus_musculus 7e-31 139

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