C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily A, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000138495 Dnaja3-003 ENSMUSG00000004069 10090 + 16:4684114-4694245 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000138495
Transcript ID Adrenal
ENSMUST00000138495 42.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009Y CIL_00009Y_0002 CGP 16:4616464-4679777
CIL_00009L CIL_00009L_0002 CGP 16:4626133-4679777
CIL_000003 CIL_000003_0003 CGP 16:4639941-4707695
CIL_0002BN CIL_0002BN_0002 CGP 16:4639989-4719356

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262375 DNAJA3-001 protein_coding Homo_sapiens 0 652
ENST00000355296 DNAJA3-002 protein_coding Homo_sapiens 0 652
ENST00000570857 DNAJA3-007 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000572009 DNAJA3-011 retained_intron Homo_sapiens 0 307
ENST00000572139 DNAJA3-010 processed_transcript Homo_sapiens 0 353
ENST00000573120 DNAJA3-013 retained_intron Homo_sapiens 0 335
ENST00000574895 DNAJA3-009 protein_coding Homo_sapiens 0 422
ENST00000575106 DNAJA3-006 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000612103 DNAJA3-202 protein_coding Homo_sapiens 0 652
ENST00000614397 DNAJA3-203 protein_coding Homo_sapiens 0 652

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