C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sorting nexin 17 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000138986  |
Snx17-004 |
ENSMUSG00000029146 |
10090 | + |
5:31193306-31198899  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001DH | CIL_0001DH_0002 | CGP | 5:31156005-31193430 |
| CIL_000133 | CIL_000133_0002 | CGP | 5:31187558-31198900 |
| CIL_0001DJ | CIL_0001DJ_0002 | CGP | 5:31193227-31202303 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000233575
|
SNX17-001 | protein_coding | Homo_sapiens | 0 | 1024 |
|
ENST00000427123
|
SNX17-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1024 |
|
ENST00000440760
|
SNX17-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 1024 |
|
ENST00000453453
|
SNX17-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 652 |
|
ENST00000464279
|
SNX17-008 | retained_intron | Homo_sapiens | 0 | 503 |
|
ENST00000484886
|
SNX17-006 | retained_intron | Homo_sapiens | 0 | 261 |
|
ENST00000489402
|
SNX17-007 | retained_intron | Homo_sapiens | 0 | 420 |
|
ENST00000493711
|
SNX17-009 | retained_intron | Homo_sapiens | 0 | 224 |
|
ENST00000494893
|
SNX17-004 | retained_intron | Homo_sapiens | 0 | 372 |
|
ENST00000537606
|
SNX17-201 | protein_coding | Homo_sapiens | 0 | 1024 |
