C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139863 Tanc1-011 ENSMUSG00000035168 10090 + 2:59646811-59845717 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000139863
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000139863 2.774±0.00 1.303±0.00 1.213±0.16 0.558±0.16 2.415±0.84 1.848±0.22 0.772±0.29 2.786±1.21 0.208±0.08 2.495±0.00 0.384±0.13 7.235±4.01 4.367±1.10 0.121±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083G CIL_00083G_0002 VISTA 2:59262344-59863132
CIL_0007X8 CIL_0007X8_0002 VISTA 2:59297936-59901449
CIL_0008PS CIL_0008PS_0002 VISTA 2:59368906-59972125
CIL_0005U4 CIL_0005U4_0002 CGP 2:59484653-59846149
CIL_0008P7 CIL_0008P7_0002 VISTA 2:59528773-60129361
CIL_0005U3 CIL_0005U3_0002 CGP 2:59612042-59882591

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007520 IMP myoblast fusion
GO:0008542 IMP visual learning
GO:0030054 IEA cell junction
GO:0030425 IDA dendrite
GO:0043025 IDA neuronal cell body
GO:0043679 IDA axon terminus
GO:0045211 IEA postsynaptic membrane
GO:0097062 IMP dendritic spine maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263635 TANC1-001 protein_coding Homo_sapiens 0 6152
ENST00000454300 TANC1-201 protein_coding Homo_sapiens 0 1478
ENST00000464096 TANC1-002 retained_intron Homo_sapiens 0 281
ENST00000465963 TANC1-003 retained_intron Homo_sapiens 0 468
ENST00000470074 TANC1-004 retained_intron Homo_sapiens 0 2008
ENST00000496406 TANC1-005 retained_intron Homo_sapiens 0 1347

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