C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubby like protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140250 Tulp1-002 ENSMUSG00000037446 10090 - 17:28352530-28362920 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderLiverOvaryTestisENSMUST00000140250
Transcript ID Adipose Bladder Liver Ovary Testis
ENSMUST00000140250 0.028±0.00 0.032±0.00 0.007±0.00 0.154±0.11 0.064±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002F1 CIL_0002F1_0002 CGP 17:28331671-28365182
CIL_0002F0 CIL_0002F0_0002 CGP 17:28351515-28517524

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229771 TULP1-003 protein_coding Homo_sapiens 0 730
ENST00000322263 TULP1-004 protein_coding Homo_sapiens 0 730
ENST00000360228 CACNA1A-001 protein_coding Homo_sapiens 0.00004 57
ENST00000373892 TULP1-002 retained_intron Homo_sapiens 0 420
ENST00000495781 TULP1-007 retained_intron Homo_sapiens 0 281
ENST00000496434 TULP1-006 retained_intron Homo_sapiens 0 361
ENST00000573710 CACNA1A-002 protein_coding Homo_sapiens 0.00004 57
ENST00000614066 TULP1-201 protein_coding Homo_sapiens 0 732
ENST00000614285 CACNA1A-201 protein_coding Homo_sapiens 0.00004 57

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