C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LSM14 homolog B (SCD6, S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140257 Lsm14b-003 ENSMUSG00000039108 10090 + 2:180027909-180033810 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000140257
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000140257 36.460±0.00 81.627±0.00 21.243±5.85 59.905±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DN CIL_0001DN_0002 CGP 2:179912146-180035465
CIL_0001DO CIL_0001DO_0002 CGP 2:180024987-180042433

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000279068 LSM14B-001 protein_coding Homo_sapiens 0 523
ENST00000279069 LSM14B-002 protein_coding Homo_sapiens 0 425
ENST00000361670 LSM14B-006 protein_coding Homo_sapiens 0 390
ENST00000370915 LSM14B-005 protein_coding Homo_sapiens 1e-36 158
ENST00000400318 LSM14B-003 protein_coding Homo_sapiens 0 329

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