C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: beclin 1, autophagy related
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140286 Becn1-010 ENSMUSG00000035086 10090 - 11:101291530-101295436 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000140286
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000140286 118.424±0.00 99.402±0.00 42.074±3.30 289.707±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SB CIL_0005SB_0002 CGP 11:101277968-101296317
CIL_0005S8 CIL_0005S8_0002 CGP 11:101279012-101302286
CIL_0005S9 CIL_0005S9_0002 CGP 11:101285952-101323537

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361523 BECN1-002 protein_coding Homo_sapiens 0 606
ENST00000438274 BECN1-003 protein_coding Homo_sapiens 0 399
ENST00000543382 BECN1-004 retained_intron Homo_sapiens 0 606
ENST00000586589 BECN1-019 protein_coding Homo_sapiens 0 562
ENST00000589493 BECN1-014 retained_intron Homo_sapiens 0 603
ENST00000589663 BECN1-017 protein_coding Homo_sapiens 0 305
ENST00000590099 BECN1-001 protein_coding Homo_sapiens 0 606
ENST00000593205 BECN1-012 protein_coding Homo_sapiens 0 257
ENST00000617806 BECN1-005 retained_intron Homo_sapiens 0 612

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