C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | beclin 1, autophagy related | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000589663  |
BECN1-017 |
ENSG00000126581 |
9606 | - |
17:42810670-42818578  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005SB | CIL_0005SB_0001 | CGP | 17:42795147-42811587 |
| CIL_0005S8 | CIL_0005S8_0001 | CGP | 17:42798792-42833350 |
| CIL_0005S9 | CIL_0005S9_0001 | CGP | 17:42810134-42843758 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006914 | IEA | autophagy |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000172233
|
Becn1-015 | protein_coding | Mus_musculus | 0 | 344 |
|
ENSMUST00000041403
|
Becn1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 344 |
|
ENSMUST00000122817
|
Becn1-003 | retained_intron | Mus_musculus | 0 | 344 |
|
ENSMUST00000139997
|
Becn1-004 | retained_intron | Mus_musculus | 0 | 344 |
|
ENSMUST00000130916
|
Becn1-001 | protein_coding | Mus_musculus | 0 | 344 |
|
ENSMUST00000140286
|
Becn1-010 | retained_intron | Mus_musculus | 0 | 305 |
|
ENSMUST00000167818
|
Becn1-017 | nonsense_mediated_decay | Mus_musculus | 0 | 305 |
|
ENSMUST00000167667
|
Becn1-014 | nonsense_mediated_decay | Mus_musculus | 0 | 305 |
|
ENSMUST00000126195
|
Becn1-011 | nonsense_mediated_decay | Mus_musculus | 0 | 230 |
|
ENSMUST00000136535
|
Becn1-008 | retained_intron | Mus_musculus | 6e-37 | 158 |
