C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntrophin, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140302 Sntg1-005 ENSMUSG00000025909 10090 - 1:8362678-9299878 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartLiverOvaryPlacentaENSMUST00000140302
Transcript ID Adipose Adrenal Bladder Brain Heart Liver Ovary Placenta
ENSMUST00000140302 0.036±0.01 0.120±0.00 0.080±0.00 1.336±0.64 0.029±0.00 0.012±0.01 0.058±0.01 0.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053R CIL_00053R_0002 CGP 1:7088920-9299878

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276467 SNTG1-201 protein_coding Homo_sapiens 0 680
ENST00000517473 SNTG1-003 protein_coding Homo_sapiens 0 680
ENST00000518864 SNTG1-002 protein_coding Homo_sapiens 0 1011
ENST00000520825 SNTG1-004 nonsense_mediated_decay Homo_sapiens 0 909
ENST00000522124 SNTG1-001 protein_coding Homo_sapiens 0 1013
ENST00000523085 SNTG1-008 protein_coding Homo_sapiens 0 346
ENST00000524004 SNTG1-009 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000620202 SNTG1-202 protein_coding Homo_sapiens 0 1013

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