C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | jumonji domain containing 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000140349  |
Jmjd6-006 |
ENSMUSG00000056962 |
10090 | - |
11:116837588-116842705  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000FJ | CIL_0000FJ_0002 | CGP | 11:116803062-116843449 |
| CIL_0003KF | CIL_0003KF_0003 | CGP | 11:116837432-116854263 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001568 | IMP | blood vessel development |
| GO:0001822 | IMP | kidney development |
| GO:0004872 | IDA | receptor activity |
| GO:0005886 | IDA | plasma membrane |
| GO:0007166 | IDA | cell surface receptor signaling pathway |
| GO:0007507 | IMP | heart development |
| GO:0030324 | IMP | lung development |
| GO:0033077 | IMP | T cell differentiation in thymus |
| GO:0042116 | IMP | macrophage activation |
| GO:0043277 | IMP | apoptotic cell clearance |
| GO:0043654 | IDA | recognition of apoptotic cell |
| GO:0048821 | IMP | erythrocyte development |
| GO:0060041 | IMP | retina development in camera-type eye |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000303996
|
JMJD6-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1520 |
|
ENST00000397625
|
JMJD6-004 | protein_coding | Homo_sapiens | 0 | 1051 |
|
ENST00000445478
|
JMJD6-001 | protein_coding | Homo_sapiens | 0 | 1051 |
|
ENST00000542934
|
JMJD6-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 1496 |
|
ENST00000585429
|
JMJD6-005 | protein_coding | Homo_sapiens | 0 | 1051 |
|
ENST00000589982
|
JMJD6-007 | retained_intron | Homo_sapiens | 0 | 313 |
|
ENST00000591460
|
JMJD6-006 | retained_intron | Homo_sapiens | 0 | 473 |
|
ENST00000617192
|
JMJD6-201 | protein_coding | Homo_sapiens | 0 | 1487 |
