C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: spermatogenesis associated 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140366 Spata6-007 ENSMUSG00000034401 10090 + 4:111720059-111768817 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000140366
Transcript ID Liver
ENSMUST00000140366 0.259±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UZ CIL_0008UZ_0002 VISTA 4:111252851-111853446

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371843 SPATA6-002 protein_coding Homo_sapiens 0 536
ENST00000371847 SPATA6-001 protein_coding Homo_sapiens 0 693
ENST00000396199 SPATA6-201 protein_coding Homo_sapiens 0 531
ENST00000463938 SPATA6-003 processed_transcript Homo_sapiens 0 311
ENST00000465990 SPATA6-009 processed_transcript Homo_sapiens 4.99997e-41 171
ENST00000471975 SPATA6-008 processed_transcript Homo_sapiens 0 785
ENST00000487543 SPATA6-007 nonsense_mediated_decay Homo_sapiens 0 424

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