C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: actinin alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140622 Actn4-004 ENSMUSG00000054808 10090 - 7:28907014-28919221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryPlacentaENSMUST00000140622
Transcript ID Breast Ovary Placenta
ENSMUST00000140622 59.825±0.00 56.545±1.79 81.021±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0030018 IDA Z disc
GO:0030863 IDA cortical cytoskeleton
GO:0051015 IDA actin filament binding
GO:0070830 IEA tight junction assembly
GO:1902396 IEA protein localization to tight junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000005682 actn3a-001 protein_coding Danio_rerio 0 516
ENSDART00000130717 ACTN4 (3 of 3)-201 protein_coding Danio_rerio 0 507
ENST00000252699 ACTN4-001 protein_coding Homo_sapiens 0 924
ENST00000495553 ACTN4-002 processed_transcript Homo_sapiens 0 643
ENST00000588618 ACTN4-007 retained_intron Homo_sapiens 0 924

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