C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine-rich repeat kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140734 Lrrk2-002 ENSMUSG00000036273 10090 + 15:91738948-91789110 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryPlacentaENSMUST00000140734
Transcript ID Colon Liver Ovary Placenta
ENSMUST00000140734 0.417±0.00 0.102±0.03 0.640±0.00 0.375±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R2 CIL_0006R2_0002 CGP 15:91267696-91816120

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298910 LRRK2-004 protein_coding Homo_sapiens 0 2948
ENST00000430804 LRRK2-005 nonsense_mediated_decay Homo_sapiens 0 2761
ENST00000479187 LRRK2-003 retained_intron Homo_sapiens 0 2948
ENST00000481256 LRRK2-007 processed_transcript Homo_sapiens 0 374

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