C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transglutaminase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140947 Tgm6-003 ENSMUSG00000027403 10090 + 2:130112416-130154232 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainMuscleOvaryPlacentaTestisENSMUST00000140947
Transcript ID Adipose Brain Muscle Ovary Placenta Testis
ENSMUST00000140947 0.026±0.00 0.027±0.00 0.037±0.00 0.035±0.00 0.041±0.03 0.067±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000FU CIL_0000FU_0002 CGP 2:130012349-130154232
CIL_0007SG CIL_0007SG_0002 VISTA 2:130051805-130652389
CIL_0000FT CIL_0000FT_0002 CGP 2:130112416-130179403

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000202625 TGM6-001 protein_coding Homo_sapiens 0 2132
ENST00000381423 TGM6-002 protein_coding Homo_sapiens 0 1886
ENST00000452443 TGM7-001 protein_coding Homo_sapiens 0.00000007 64
ENST00000477505 TGM6-003 processed_transcript Homo_sapiens 0 514

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