C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box N2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141052 Foxn2-002 ENSMUSG00000034998 10090 + 17:88440775-88487251 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000141052
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000141052 0.858±0.00 1.491±0.59 0.618±0.00 2.247±1.00 1.391±0.54 0.784±0.25 0.899±0.00 0.685±0.12 1.261±0.00 2.023±0.72 0.459±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063U CIL_00063U_0002 CGP 17:87990859-88490533
CIL_000008 CIL_000008_0002 CGP 17:88440711-88588367

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035914 IMP skeletal muscle cell differentiation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340553 FOXN2-001 protein_coding Homo_sapiens 0 732
ENST00000413569 FOXN2-002 protein_coding Homo_sapiens 0 806
ENST00000616844 FOXN2-201 protein_coding Homo_sapiens 0 704

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