C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: elongation factor Tu GTP binding domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141273 Eftud2-007 ENSMUSG00000020929 10090 - 11:102840211-102847979 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000141273
Transcript ID Ovary Placenta Testis
ENSMUST00000141273 31.995±7.59 61.611±10.36 35.932±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ST CIL_0007ST_0002 VISTA 11:102292756-102896210
CIL_0006U5 CIL_0006U5_0002 CGP 11:102835849-102880985
CIL_0006UA CIL_0006UA_0002 CGP 11:102838473-102885216

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000402521 EFTUD2-004 protein_coding Homo_sapiens 0 1214
ENST00000426333 EFTUD2-002 protein_coding Homo_sapiens 0 1214
ENST00000586276 EFTUD2-008 retained_intron Homo_sapiens 0 870
ENST00000588340 EFTUD2-028 retained_intron Homo_sapiens 2e-33 147
ENST00000589769 EFTUD2-026 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000590124 EFTUD2-025 protein_coding Homo_sapiens 0 599
ENST00000590367 EFTUD2-007 retained_intron Homo_sapiens 0 1053
ENST00000590977 EFTUD2-009 retained_intron Homo_sapiens 0 649
ENST00000591382 EFTUD2-006 protein_coding Homo_sapiens 0 1214
ENST00000592576 EFTUD2-003 protein_coding Homo_sapiens 0 1214

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