C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141507 Kdm4b-003 ENSMUSG00000024201 10090 + 17:56393920-56402870 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000141507
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000141507 2.779±0.20 7.200±1.25 3.923±0.46 6.470±0.00 2.197±0.00 4.083±0.70 2.333±0.33 1.868±0.16 1.219±0.29 3.623±0.93 5.511±1.71 2.141±0.84 3.495±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GV CIL_0005GV_0003 CGP 17:56303321-56402870
CIL_0005ON CIL_0005ON_0002 CGP 17:56326062-56476483

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000159111 KDM4B-001 protein_coding Homo_sapiens 0 1064
ENST00000536461 KDM4B-002 protein_coding Homo_sapiens 0 1064
ENST00000588166 KDM4B-003 processed_transcript Homo_sapiens 0 261
ENST00000588361 KDM4B-012 protein_coding Homo_sapiens 0 449
ENST00000589104 KDM4B-007 retained_intron Homo_sapiens 0 1064
ENST00000611640 KDM4B-201 protein_coding Homo_sapiens 0 1064

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