C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: period circadian clock 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142392 Per1-004 ENSMUSG00000020893 10090 + 11:69100509-69106296 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0004871 IEA signal transducer activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007165 IEA signal transduction
GO:0007623 TAS circadian rhythm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079459 per1a-201 protein_coding Danio_rerio 0.000000007 68
ENSDART00000100468 per1a-001 protein_coding Danio_rerio 0.000000007 68
ENST00000317276 PER1-001 protein_coding Homo_sapiens 0 2109
ENST00000354903 PER1-002 protein_coding Homo_sapiens 0 1958
ENST00000577253 PER1-008 protein_coding Homo_sapiens 0 385
ENST00000578089 PER1-015 processed_transcript Homo_sapiens 2e-28 130
ENST00000578223 PER1-011 retained_intron Homo_sapiens 0 693
ENST00000578950 PER1-018 retained_intron Homo_sapiens 0 320
ENST00000579065 PER1-004 retained_intron Homo_sapiens 0 1118
ENST00000581082 PER1-005 protein_coding Homo_sapiens 0 1170
ENST00000581395 PER1-003 nonsense_mediated_decay Homo_sapiens 0 2798
ENST00000581703 PER1-009 protein_coding Homo_sapiens 0 592
ENST00000582719 PER1-006 nonsense_mediated_decay Homo_sapiens 0 2109
ENST00000583559 PER1-016 protein_coding Homo_sapiens 0 315
ENST00000584202 PER1-010 protein_coding Homo_sapiens 0 479

Loading