C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: period circadian clock 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000581395 PER1-003 ENSG00000179094 9606 - 17:8144056-8156506 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142392 Per1-004 nonsense_mediated_decay Mus_musculus 0 2798
ENSMUST00000101004 Per1-003 protein_coding Mus_musculus 0 2113
ENSMUST00000166748 Per1-201 protein_coding Mus_musculus 0 2109
ENSMUST00000021271 Per1-001 protein_coding Mus_musculus 0 2109
ENSMUST00000102605 Per1-002 protein_coding Mus_musculus 0 1170
ENSMUST00000132462 Per1-005 protein_coding Mus_musculus 0 449
ENSDART00000079459 per1a-201 protein_coding Danio_rerio 0.00000003 66
ENSDART00000100468 per1a-001 protein_coding Danio_rerio 0.00000003 66

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