C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: period homolog 1a (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000100468 per1a-001 ENSDARG00000056885 7955 - 10:23012653-23028581 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000100468
Transcript ID Brain Heart Kidney Liver
ENSDART00000100468 1.122±0.00 0.788±0.00 0.146±0.00 0.364±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021271 Per1-001 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000101004 Per1-003 protein_coding Mus_musculus 0.000000008 68
ENSMUST00000102605 Per1-002 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000142392 Per1-004 nonsense_mediated_decay Mus_musculus 0.000000007 68
ENSMUST00000166748 Per1-201 protein_coding Mus_musculus 0.00000001 68
ENST00000317276 PER1-001 protein_coding Homo_sapiens 0.00000004 66
ENST00000354903 PER1-002 protein_coding Homo_sapiens 0.00000003 66
ENST00000581082 PER1-005 protein_coding Homo_sapiens 0.00000004 66
ENST00000581395 PER1-003 nonsense_mediated_decay Homo_sapiens 0.00000003 66
ENST00000582719 PER1-006 nonsense_mediated_decay Homo_sapiens 0.00000003 66

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