C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142407 Ube2k-001 ENSMUSG00000029203 10090 + 5:65537233-65598988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000142407
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000142407 8.882±2.04 6.829±1.46 6.393±0.77 16.807±8.13 6.972±4.02 9.670±0.72 3.107±0.40 6.792±1.25 4.828±1.24 11.949±0.24 2.609±0.26 11.908±4.81 3.346±1.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TW CIL_0002TW_0003 CGP 5:65446844-65598988
CIL_0002TZ CIL_0002TZ_0003 CGP 5:65537233-65697856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0016881 IEA acid-amino acid ligase activity
GO:0031625 ISS ubiquitin protein ligase binding
GO:0032434 IDA regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0034450 IEA ubiquitin-ubiquitin ligase activity
GO:0070059 IEA intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0070062 IEA extracellular vesicular exosome
GO:0070936 ISS protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261427 UBE2K-001 protein_coding Homo_sapiens 0 1930
ENST00000438068 UBE2K-002 processed_transcript Homo_sapiens 0 1480
ENST00000445950 UBE2K-006 protein_coding Homo_sapiens 0 843
ENST00000503368 UBE2K-005 protein_coding Homo_sapiens 0 959
ENST00000510719 UBE2K-007 nonsense_mediated_decay Homo_sapiens 0 695
ENST00000510934 UBE2K-004 protein_coding Homo_sapiens 0 665
ENST00000513231 UBE2K-003 processed_transcript Homo_sapiens 0 883

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