C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: seizure related gene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142542 Sez6-005 ENSMUSG00000000632 10090 + 11:77930839-77979048 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastMuscleOvaryENSMUST00000142542
Transcript ID Adipose Brain Breast Muscle Ovary
ENSMUST00000142542 0.309±0.00 12.433±2.93 0.066±0.00 0.044±0.00 0.198±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076L CIL_00076L_0003 CGP 11:77880615-77979048
CIL_0006M6 CIL_0006M6_0002 CGP 11:77930800-78030539

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317338 SEZ6-002 protein_coding Homo_sapiens 0 2117
ENST00000335960 SEZ6-201 protein_coding Homo_sapiens 0 1999
ENST00000360295 SEZ6-001 protein_coding Homo_sapiens 0 2117
ENST00000442608 SEZ6-012 protein_coding Homo_sapiens 0 1958
ENST00000539265 SEZ6-013 protein_coding Homo_sapiens 0 444
ENST00000540419 SEZ6-006 nonsense_mediated_decay Homo_sapiens 0 1585
ENST00000540632 SEZ6-003 protein_coding Homo_sapiens 0 1677
ENST00000544224 SEZ6-011 retained_intron Homo_sapiens 0 667

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