C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 18 (vesicular monoamine), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142548 Slc18a1-002 ENSMUSG00000036330 10090 - 8:69065110-69077228 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonMuscleOvaryENSMUST00000142548
Transcript ID Colon Muscle Ovary
ENSMUST00000142548 0.496±0.00 0.047±0.00 0.250±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TS CIL_0003TS_0002 CGP 8:68880491-69089235
CIL_0003TP CIL_0003TP_0002 CGP 8:69037711-69113711

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265808 SLC18A1-002 protein_coding Homo_sapiens 0 754
ENST00000276373 SLC18A1-001 protein_coding Homo_sapiens 0 754
ENST00000381608 SLC18A1-008 protein_coding Homo_sapiens 0 754
ENST00000437980 SLC18A1-201 protein_coding Homo_sapiens 0 754
ENST00000440926 SLC18A1-202 protein_coding Homo_sapiens 0 754
ENST00000517776 SLC18A1-004 nonsense_mediated_decay Homo_sapiens 0 754
ENST00000519026 SLC18A1-003 protein_coding Homo_sapiens 0 754
ENST00000524272 SLC18A1-006 processed_transcript Homo_sapiens 0 350

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