C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 18 (vesicular monoamine transporter), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519026 SLC18A1-003 ENSG00000036565 9606 - 8:20145498-20183172 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonPlacentaTestisENST00000519026
Transcript ID Colon Placenta Testis
ENST00000519026 0.073±0.00 0.031±0.00 0.067±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003TS CIL_0003TS_0001 CGP 8:19901717-20183206
CIL_0003TP CIL_0003TP_0001 CGP 8:20144855-20226819

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006836 IEA neurotransmitter transport
GO:0006855 IEA drug transmembrane transport
GO:0008504 TAS monoamine transmembrane transporter activity
GO:0015238 IEA drug transmembrane transporter activity
GO:0015844 TAS monoamine transport
GO:0015893 IEA drug transport
GO:0016021 IEA integral component of membrane
GO:0055085 TAS:IEA transmembrane transport
GO:0070083 TAS clathrin-sculpted monoamine transport vesicle membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037478 Slc18a1-001 protein_coding Mus_musculus 0 815
ENSMUST00000142548 Slc18a1-002 retained_intron Mus_musculus 0 754

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