C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: purinergic receptor P2X, ligand-gated ion channel 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142664 P2rx4-004 ENSMUSG00000029470 10090 + 5:122707654-122727840 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000142664
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000142664 15.202±0.75 7.756±1.03 2.511±1.69 10.886±0.40 28.530±0.00 2.992±0.16 10.910±1.01 7.503±0.52 16.371±0.37 0.674±0.09 6.557±1.46 8.129±4.52 1.208±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZL CIL_0002ZL_0002 CGP 5:122643911-122729738
CIL_0002ZK CIL_0002ZK_0002 CGP 5:122707584-122779410

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001614 IBA purinergic nucleotide receptor activity
GO:0004931 IMP extracellular ATP-gated cation channel activity
GO:0005524 IEA ATP binding
GO:0005639 IBA integral component of nuclear inner membrane
GO:0005887 ISS integral component of plasma membrane
GO:0006809 IDA nitric oxide biosynthetic process
GO:0006816 IMP calcium ion transport
GO:0035590 IEA purinergic nucleotide receptor signaling pathway
GO:0042311 IMP vasodilation
GO:0045177 IDA apical part of cell
GO:0060079 IMP regulation of excitatory postsynaptic membrane potential
GO:0098655 IMP cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337233 P2RX4-001 protein_coding Homo_sapiens 0 1029
ENST00000359949 P2RX4-002 protein_coding Homo_sapiens 0 856
ENST00000397924 P2RX4-007 retained_intron Homo_sapiens 0 265
ENST00000499638 P2RX4-004 retained_intron Homo_sapiens 0 542
ENST00000538417 P2RX4-014 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000538701 P2RX4-011 protein_coding Homo_sapiens 0 353
ENST00000540930 P2RX4-010 processed_transcript Homo_sapiens 0 457
ENST00000541187 P2RX4-012 retained_intron Homo_sapiens 0 287
ENST00000542067 P2RX4-005 protein_coding Homo_sapiens 0 542
ENST00000543171 P2RX4-201 protein_coding Homo_sapiens 0 1029
ENST00000543318 P2RX4-006 nonsense_mediated_decay Homo_sapiens 0 592
ENST00000543430 P2RX4-008 retained_intron Homo_sapiens 0 545
ENST00000543984 P2RX4-009 nonsense_mediated_decay Homo_sapiens 0 676

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