C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: guanylate binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142731 Gbp3-006 ENSMUSG00000028268 10090 + 3:142560175-142565508 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastENSMUST00000142731
Transcript ID Adipose Adrenal Breast
ENSMUST00000142731 3.732±0.00 1.409±0.28 2.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000033 CIL_000033_000D CGP 3:142496934-142619179
CIL_000033 CIL_000033_000C CGP 3:142530338-142573209
CIL_000033 CIL_000033_0009 CGP 3:142560052-142638008

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000097448 si:ch211-209n20.1-201 protein_coding Danio_rerio 2.99878e-43 180
ENSDART00000097447 si:ch211-209n20.1-202 protein_coding Danio_rerio 2.99878e-43 180
ENSDART00000141250 si:ch211-209n20.1-001 protein_coding Danio_rerio 2.99878e-43 180
ENST00000294671 GBP7-001 protein_coding Homo_sapiens 0 523
ENST00000355754 GBP4-001 protein_coding Homo_sapiens 0 582
ENST00000370456 GBP6-001 protein_coding Homo_sapiens 0 521

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