C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ERGIC and golgi 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142859 Ergic3-009 ENSMUSG00000005881 10090 + 2:156008619-156017638 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000142859
Transcript ID Brain
ENSMUST00000142859 65.709±27.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_0005FV CIL_0005FV_0002 CGP 2:155973279-156018279

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123923 DHX29-202 protein_coding Danio_rerio 0.000004 57
ENSDART00000129467 DHX29-201 protein_coding Danio_rerio 0.000004 57
ENST00000279052 ERGIC3-005 retained_intron Homo_sapiens 0 202
ENST00000348547 ERGIC3-001 protein_coding Homo_sapiens 0 941
ENST00000357394 ERGIC3-003 protein_coding Homo_sapiens 0 1027
ENST00000411577 ERGIC3-011 protein_coding Homo_sapiens 0 202
ENST00000413587 ERGIC3-017 protein_coding Homo_sapiens 0 896
ENST00000416206 ERGIC3-006 protein_coding Homo_sapiens 0 651
ENST00000438317 ERGIC3-010 nonsense_mediated_decay Homo_sapiens 0 202
ENST00000442139 ERGIC3-008 protein_coding Homo_sapiens 0 224
ENST00000447986 ERGIC3-004 retained_intron Homo_sapiens 0 651
ENST00000451605 ERGIC3-015 protein_coding Homo_sapiens 9e-36 154
ENST00000461043 ERGIC3-012 retained_intron Homo_sapiens 0 651
ENST00000465298 ERGIC3-020 retained_intron Homo_sapiens 0 359
ENST00000475211 ERGIC3-021 retained_intron Homo_sapiens 1e-24 117
ENST00000482338 ERGIC3-014 processed_transcript Homo_sapiens 0 582
ENST00000486268 ERGIC3-018 processed_transcript Homo_sapiens 0 202
ENST00000489071 ERGIC3-019 processed_transcript Homo_sapiens 0 453
ENST00000496172 ERGIC3-013 retained_intron Homo_sapiens 0 859

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