C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhophilin, Rho GTPase binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143056 Rhpn1-004 ENSMUSG00000022580 10090 + 15:75704318-75714405 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000143056
Transcript ID Adipose Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000143056 0.054±0.00 0.065±0.01 0.046±0.01 0.026±0.00 1.574±0.00 0.021±0.01 0.063±0.03 0.551±0.17 0.451±0.06 0.599±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0001NH CIL_0001NH_0002 CGP 15:75657035-75714410
CIL_0001NI CIL_0001NI_0002 CGP 15:75704280-75747922

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289013 RHPN1-001 protein_coding Homo_sapiens 0 420
ENST00000522335 RHPN1-002 retained_intron Homo_sapiens 0 420
ENST00000620174 RHPN1-201 protein_coding Homo_sapiens 0 420

Loading