C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 binding protein kinase alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143176 Cdc42bpa-009 ENSMUSG00000026490 10090 + 1:180109192-180165602 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainKidneyLiverLungOvaryPlacentaENSMUST00000143176
Transcript ID Adipose Bladder Brain Kidney Liver Lung Ovary Placenta
ENSMUST00000143176 8.320±0.36 10.421±1.08 14.116±0.33 7.185±0.29 3.893±1.67 12.224±0.73 4.408±0.43 2.535±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000985 CIL_000985_0002 VISTA 1:179908053-180512549

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334218 CDC42BPA-003 protein_coding Homo_sapiens 0 2309
ENST00000366764 CDC42BPA-201 protein_coding Homo_sapiens 0 2309
ENST00000366766 CDC42BPA-202 protein_coding Homo_sapiens 0 2309
ENST00000366767 CDC42BPA-002 protein_coding Homo_sapiens 0 3066
ENST00000366769 CDC42BPA-001 protein_coding Homo_sapiens 0 3066
ENST00000429440 CDC42BPA-007 protein_coding Homo_sapiens 0 1879
ENST00000441725 CDC42BPA-005 protein_coding Homo_sapiens 0 1967
ENST00000442054 CDC42BPA-004 protein_coding Homo_sapiens 0 2309
ENST00000448940 CDC42BPA-006 protein_coding Homo_sapiens 0 3790
ENST00000488131 CDC42BPA-008 processed_transcript Homo_sapiens 0 761

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