C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143518 Kdm1b-002 ENSMUSG00000038080 10090 + 13:47063006-47084596 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000143518
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000143518 0.361±0.00 0.485±0.07 1.802±0.19 4.593±1.02 0.400±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090E CIL_00090E_0002 VISTA 13:46584783-47186478
CIL_0008X6 CIL_0008X6_0002 VISTA 13:47010584-47612217
CIL_0003RL CIL_0003RL_0002 CGP 13:47012558-47044737
CIL_0003RU CIL_0003RU_0002 CGP 13:47025170-47084613
CIL_0003RV CIL_0003RV_0002 CGP 13:47043499-47106201

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297792 KDM1B-002 protein_coding Homo_sapiens 0 1395
ENST00000449850 KDM1B-004 protein_coding Homo_sapiens 0 926
ENST00000546309 KDM1B-003 protein_coding Homo_sapiens 0 448

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