C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM and SH3 protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000584106 LASP1-004 ENSG00000002834 9606 + 17:38870061-38899200 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungMuscleOvaryPlacentaENST00000584106
Transcript ID Bladder Lung Muscle Ovary Placenta
ENST00000584106 1.928±0.00 3.602±0.00 2.433±0.00 64.023±0.00 35.822±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QO CIL_0006QO_0001 CGP 17:38847865-38921770

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043843 Lasp1-001 protein_coding Mus_musculus 0 601
ENSMUST00000118257 Gm4875-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000152962 Lasp1-006 protein_coding Mus_musculus 0 418
ENSMUST00000129558 Lasp1-005 protein_coding Mus_musculus 0 418
ENSMUST00000148280 Lasp1-011 protein_coding Mus_musculus 0 416
ENSMUST00000129828 Lasp1-010 protein_coding Mus_musculus 0 416
ENSMUST00000146572 Lasp1-007 protein_coding Mus_musculus 0 416
ENSMUST00000107569 Lasp1-017 retained_intron Mus_musculus 0 318
ENSMUST00000155762 Lasp1-013 protein_coding Mus_musculus 0 283
ENSDART00000051807 lasp1-001 protein_coding Danio_rerio 0 255
ENSDART00000064838 lasp1-002 protein_coding Danio_rerio 0 220
ENSMUST00000143571 Lasp1-004 protein_coding Mus_musculus 0 209
ENSDART00000140376 lasp1-003 processed_transcript Danio_rerio 2e-36 158

Loading