C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SEC23B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143573 Sec23b-005 ENSMUSG00000027429 10090 + 2:144556229-144568027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverPlacentaENSMUST00000143573
Transcript ID Bladder Brain Liver Placenta
ENSMUST00000143573 7.376±0.00 6.063±0.00 5.274±0.00 15.872±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MU CIL_0002MU_0002 CGP 2:144542265-144590749
CIL_0000YA CIL_0000YA_0002 CGP 2:144556229-144595366

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006886 IEA intracellular protein transport
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0008270 IEA zinc ion binding
GO:0030127 IEA COPII vesicle coat
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262544 SEC23B-005 protein_coding Homo_sapiens 0 1131
ENST00000336714 SEC23B-003 protein_coding Homo_sapiens 0 1160
ENST00000377465 SEC23B-004 protein_coding Homo_sapiens 0 1131
ENST00000377475 SEC23B-002 protein_coding Homo_sapiens 0 1131
ENST00000450074 SEC23B-001 protein_coding Homo_sapiens 0 1133

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