C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone deacetylase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143660 Hdac3-003 ENSMUSG00000024454 10090 - 18:37935844-37945564 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QD CIL_0006QD_0002 CGP 18:37843601-37954988
CIL_0006QE CIL_0006QE_0002 CGP 18:37935844-37959179

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000054626 hdac3-001 protein_coding Danio_rerio 0 255
ENSDART00000145250 hdac3-002 processed_transcript Danio_rerio 5e-26 124
ENST00000305264 HDAC3-001 protein_coding Homo_sapiens 0 466
ENST00000459727 HDAC3-012 processed_transcript Homo_sapiens 0 300
ENST00000467533 HDAC3-005 retained_intron Homo_sapiens 2e-22 110
ENST00000469207 HDAC3-013 processed_transcript Homo_sapiens 0 370
ENST00000469550 HDAC3-014 retained_intron Homo_sapiens 0 466
ENST00000471968 HDAC3-004 retained_intron Homo_sapiens 5e-33 145
ENST00000475549 HDAC3-010 retained_intron Homo_sapiens 1.4013e-45 185
ENST00000476739 HDAC3-008 retained_intron Homo_sapiens 0 189
ENST00000486618 HDAC3-009 retained_intron Homo_sapiens 0 219
ENST00000490808 HDAC3-006 retained_intron Homo_sapiens 0 263
ENST00000491581 HDAC3-011 retained_intron Homo_sapiens 0 257
ENST00000492407 HDAC3-007 retained_intron Homo_sapiens 0 797
ENST00000495485 HDAC3-003 retained_intron Homo_sapiens 0 315
ENST00000519474 HDAC3-015 nonsense_mediated_decay Homo_sapiens 0 466
ENST00000523088 HDAC3-016 protein_coding Homo_sapiens 0 466

Loading