C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131504-ENSG00000171720 CGP 9606 5:141515016-141636870
GeneTranscriptPositionBiotype
ENSG00000131504 (DIAPH1)
diaphanous-related formin 1 		ENST00000253811 (DIAPH1-201) 141515022-141619055 protein_coding
ENST00000389054 (DIAPH1-001) 141515016-141619055 protein_coding
ENST00000389057 (DIAPH1-202) 141515022-141619055 protein_coding
ENST00000398557 (DIAPH1-203) 141515022-141619055 protein_coding
ENST00000448451 (DIAPH1-004) 141515157-141526147 protein_coding
ENST00000468119 (DIAPH1-009) 141516572-141524770 processed_transcript
ENST00000472516 (DIAPH1-006) 141577989-141579129 retained_intron
ENST00000476339 (DIAPH1-005) 141515016-141524755 retained_intron
ENST00000491754 (DIAPH1-008) 141528544-141560701 processed_transcript
ENST00000494967 (DIAPH1-007) 141528545-141534488 processed_transcript
ENST00000518047 (DIAPH1-012) 141515975-141618914 protein_coding
ENST00000518484 (DIAPH1-013) 141528800-141557854 processed_transcript
ENST00000520569 (DIAPH1-003) 141515022-141587197 protein_coding
ENST00000521457 (DIAPH1-002) 141516799-141618932 nonsense_mediated_decay
ENST00000523100 (DIAPH1-010) 141577493-141618999 nonsense_mediated_decay
ENST00000524301 (DIAPH1-011) 141583519-141587485 protein_coding
ENSG00000171720 (HDAC3)
histone deacetylase 3 		ENST00000305264 (HDAC3-001) 141620876-141636870 protein_coding
ENST00000459727 (HDAC3-012) 141621485-141628562 processed_transcript
ENST00000467533 (HDAC3-005) 141625701-141629972 retained_intron
ENST00000469207 (HDAC3-013) 141620925-141626070 processed_transcript
ENST00000469550 (HDAC3-014) 141620876-141635164 retained_intron
ENST00000471968 (HDAC3-004) 141629266-141634856 retained_intron
ENST00000475549 (HDAC3-010) 141626026-141626444 retained_intron
ENST00000476739 (HDAC3-008) 141627899-141629224 retained_intron
ENST00000486618 (HDAC3-009) 141625208-141626485 retained_intron
ENST00000490808 (HDAC3-006) 141628605-141629742 retained_intron
ENST00000491581 (HDAC3-011) 141624862-141627936 retained_intron
ENST00000492407 (HDAC3-007) 141625750-141629258 retained_intron
ENST00000492506 (HDAC3-002) 141635909-141636843 retained_intron
ENST00000495485 (HDAC3-003) 141628559-141636825 retained_intron
ENST00000519474 (HDAC3-015) 141627892-141636838 nonsense_mediated_decay
ENST00000523088 (HDAC3-016) 141626233-141636833 protein_coding
ENSG00000240974 (CTD-2024I7.1)
 ENST00000496103 (CTD-2024I7.1-001) 141588935-141589142 processed_pseudogene
ENSG00000246422 (CTD-2024I7.13)
 ENST00000502205 (CTD-2024I7.13-001) 141558311-141565263 antisense
CIL_0006QD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024456-ENSMUSG00000024454 CGP 10090 18:37843601-37954988
GeneTranscriptPositionBiotype
ENSMUSG00000024454 (Hdac3)
histone deacetylase 3 		ENSMUST00000043498 (Hdac3-001) 37936972-37954988 protein_coding
ENSMUST00000143660 (Hdac3-003) 37935844-37945564 retained_intron
ENSMUST00000144471 (Hdac3-004) 37936972-37944075 retained_intron
ENSMUST00000153945 (Hdac3-002) 37936978-37954931 processed_transcript
ENSMUSG00000024456 (Diap1)
diaphanous homolog 1 (Drosophila) 		ENSMUST00000025337 (Diap1-002) 37843603-37935381 protein_coding
ENSMUST00000080033 (Diap1-201) 37844824-37935411 protein_coding
ENSMUST00000115629 (Diap1-202) 37843605-37906416 protein_coding
ENSMUST00000115631 (Diap1-003) 37843603-37935423 protein_coding
ENSMUST00000115634 (Diap1-001) 37843601-37935476 protein_coding
ENSMUST00000124822 (Diap1-005) 37855485-37856144 retained_intron
ENSMUST00000127346 (Diap1-006) 37845100-37853407 processed_transcript
ENSMUST00000129688 (Diap1-004) 37896157-37897942 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QD_0001ENSG00000131504ENST00000253811ENST00000389057ENST00000398557ENST00000448451ENST00000494967ENST00000518047ENST00000520569ENST00000521457ENST00000523100ENSG00000171720ENST00000305264ENST00000459727ENST00000469207ENST00000469550ENST00000491581ENST00000492506ENSG00000240974ENST00000496103ENSG00000246422ENST00000502205CIL_0006QD_0002ENSMUSG00000024454ENSMUST00000043498ENSMUST00000144471ENSMUST00000153945ENSMUSG00000024456ENSMUST00000025337ENSMUST00000080033ENSMUST00000115629ENSMUST00000115631ENSMUST00000115634
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131504 ENST00000253811 N/A N/A N/A N/A N/A 3.360±1.89 N/A 4.423±0.00 9.483±0.00 5.582±2.45 27.211±0.00 4.319±0.96 5.597±0.00 4.978±0.00
ENST00000389054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000389057 N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000398557 N/A N/A N/A N/A 1.698±0.00 N/A N/A N/A N/A N/A 12.269±0.00 2.629±0.00 N/A N/A
ENST00000448451 N/A 8.422±0.00 N/A 4.512±0.00 N/A N/A N/A 14.917±0.00 18.111±0.00 N/A 49.787±0.00 6.453±0.00 10.461±1.46 N/A
ENST00000468119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.608±0.00 N/A N/A N/A
ENST00000518047 N/A N/A N/A 0.362±0.00 N/A N/A N/A N/A N/A N/A 1.599±0.00 N/A 4.278±0.00 4.296±0.00
ENST00000518484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520569 N/A N/A 2.055±0.00 N/A 1.694±0.00 3.750±0.00 N/A 5.411±0.00 N/A N/A 11.663±0.00 6.553±0.94 3.760±0.00 9.105±0.00
ENST00000521457 7.359±0.00 N/A 4.774±0.00 1.132±0.22 3.094±0.00 5.966±0.00 0.310±0.00 6.699±0.00 2.242±0.00 4.124±0.00 N/A 2.557±0.00 N/A N/A
ENST00000523100 N/A N/A N/A 1.133±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171720 ENST00000305264 8.265±0.00 9.141±0.00 N/A 8.699±4.23 5.001±2.04 2.935±1.39 7.122±5.46 9.078±0.98 7.507±4.53 5.789±4.13 7.042±6.50 12.916±9.10 16.216±8.59 9.074±1.92
ENST00000459727 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.976±0.00 N/A 38.043±0.00 34.826±0.00 42.920±0.00
ENST00000467533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.240±1.74 19.322±0.00 15.372±0.00
ENST00000469550 2.006±0.00 6.170±0.00 N/A N/A 1.500±0.00 1.181±0.28 N/A N/A N/A N/A N/A 1.457±0.00 N/A N/A
ENST00000471968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491581 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.213±0.00 1.477±0.00 N/A N/A N/A
ENST00000492407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492506 N/A N/A N/A N/A N/A N/A N/A N/A 3.047±0.00 N/A N/A N/A N/A N/A
ENST00000495485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240974 ENST00000496103 N/A 0.134±0.00 N/A N/A 0.808±0.00 N/A N/A 0.066±0.00 0.343±0.00 N/A N/A 0.249±0.00 N/A 0.137±0.02
ENSG00000246422 ENST00000502205 0.044±0.00 0.036±0.00 0.222±0.00 0.027±0.00 0.037±0.00 N/A 0.041±0.00 N/A 0.099±0.09 N/A 0.025±0.00 0.089±0.14 0.034±0.00 0.620±0.24
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024454 ENSMUST00000043498 13.498±0.61 25.830±2.04 13.131±2.85 36.488±20.26 37.720±16.93 8.230±1.98 8.148±1.37 9.091±0.85 8.387±4.11 7.035±2.76 14.939±1.89 22.906±15.04 21.668±8.99 7.995±3.81
ENSMUST00000143660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144471 N/A 10.590±1.44 6.859±0.92 7.079±3.75 10.017±2.22 6.113±0.25 3.666±0.40 N/A 4.039±0.18 4.971±0.69 4.062±0.00 9.393±3.28 4.560±0.00 N/A
ENSMUST00000153945 N/A N/A N/A 20.827±0.00 N/A N/A N/A N/A N/A N/A N/A 21.588±0.00 20.514±1.87 6.076±0.00
ENSMUSG00000024456 ENSMUST00000025337 1.046±0.02 N/A 3.426±1.61 9.194±5.68 1.083±0.00 N/A 0.872±0.19 N/A 2.044±0.33 4.469±0.00 6.833±3.90 8.100±7.07 11.704±6.53 1.372±0.28
ENSMUST00000080033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.839±0.00 3.933±0.00 2.793±0.00
ENSMUST00000115629 5.724±0.22 N/A N/A 2.587±0.00 3.353±0.14 N/A 1.020±0.00 1.462±0.00 2.819±0.11 9.129±0.00 N/A 2.555±0.57 1.724±0.00 0.770±0.00
ENSMUST00000115631 N/A 1.318±0.04 N/A N/A 2.134±0.26 5.050±0.43 N/A N/A 2.215±0.68 3.660±0.00 N/A 4.256±0.77 N/A 0.623±0.00
ENSMUST00000115634 1.616±0.19 1.904±0.68 2.321±0.71 1.997±0.00 5.054±0.00 4.994±1.66 0.806±0.26 2.863±0.49 2.110±1.03 7.567±0.28 N/A 2.264±0.85 4.553±0.92 1.065±0.07
ENSMUST00000124822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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