C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: patatin-like phospholipase domain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143771 Pnpla8-003 ENSMUSG00000036257 10090 + 12:44282573-44312343 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaENSMUST00000143771
Transcript ID Brain Muscle Ovary Placenta
ENSMUST00000143771 3.826±0.00 3.824±0.00 6.140±0.24 5.646±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PF CIL_0008PF_0002 VISTA 12:44102519-44705770
CIL_0008CE CIL_0008CE_0002 VISTA 12:44102792-44705590
CIL_00057O CIL_00057O_0002 CGP 12:44221370-44601846

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006629 IEA lipid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257694 PNPLA8-001 protein_coding Homo_sapiens 0 1668
ENST00000415498 PNPLA8-007 protein_coding Homo_sapiens 0 228
ENST00000422087 PNPLA8-002 protein_coding Homo_sapiens 0 1672
ENST00000426128 PNPLA8-006 protein_coding Homo_sapiens 0 2172
ENST00000427008 PNPLA8-009 protein_coding Homo_sapiens 0 628
ENST00000436062 PNPLA8-003 protein_coding Homo_sapiens 0 1670
ENST00000453085 PNPLA8-005 protein_coding Homo_sapiens 0 1511
ENST00000453144 PNPLA8-004 protein_coding Homo_sapiens 0 1506
ENST00000462466 PNPLA8-012 retained_intron Homo_sapiens 0 496
ENST00000476592 PNPLA8-011 processed_transcript Homo_sapiens 0 710
ENST00000483879 PNPLA8-010 processed_transcript Homo_sapiens 0 496
ENST00000489738 PNPLA8-008 processed_transcript Homo_sapiens 0 326

Loading