C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00057O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078745-ENSDARG00000006396 CGP 7955 4:12690416-12796409
GeneTranscriptPositionBiotype
ENSDARG00000006396 (nrcama)
neuronal cell adhesion molecule a 		ENSDART00000007237 (nrcama-201) 12761120-12796409 protein_coding
ENSDART00000109195 (nrcama-202) 12761061-12792899 protein_coding
ENSDART00000110370 (nrcama-203) 12761061-12792899 protein_coding
ENSDART00000122041 (nrcama-001) 12761094-12792854 protein_coding
ENSDARG00000078745 (pnpla8)
patatin-like phospholipase domain containing 8 		ENSDART00000108928 (pnpla8-001) 12690416-12707727 protein_coding
ENSDART00000135165 (pnpla8-002) 12695538-12696201 retained_intron
ENSDART00000155349 (pnpla8-201) 12692487-12707211 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00057O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036257-ENSMUSG00000020598 CGP 10090 12:44221370-44601846
GeneTranscriptPositionBiotype
ENSMUSG00000020598 (Nrcam)
neuronal cell adhesion molecule 		ENSMUST00000020939 (Nrcam-201) 44328885-44601846 protein_coding
ENSMUST00000110748 (Nrcam-202) 44328885-44601846 protein_coding
ENSMUSG00000036257 (Pnpla8)
patatin-like phospholipase domain containing 8 		ENSMUST00000043082 (Pnpla8-001) 44269186-44312244 protein_coding
ENSMUST00000122902 (Pnpla8-002) 44221370-44312092 protein_coding
ENSMUST00000125757 (Pnpla8-004) 44275271-44282890 protein_coding
ENSMUST00000143771 (Pnpla8-003) 44282573-44312343 protein_coding
ENSMUST00000156082 (Pnpla8-005) 44299277-44311844 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057O_0001ENSDARG00000006396ENSDART00000007237ENSDART00000109195ENSDART00000110370ENSDART00000122041ENSDARG00000078745ENSDART00000108928ENSDART00000135165ENSDART00000155349CIL_00057O_0002ENSMUSG00000020598ENSMUST00000020939ENSMUST00000110748ENSMUSG00000036257ENSMUST00000043082ENSMUST00000122902ENSMUST00000125757ENSMUST00000143771ENSMUST00000156082
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057O_0001ENSDARG00000006396ENSDART00000007237ENSDART00000110370ENSDART00000122041ENSDARG00000078745ENSDART00000108928ENSDART00000155349CIL_00057O_0002ENSMUSG00000020598ENSMUST00000020939ENSMUST00000110748ENSMUSG00000036257ENSMUST00000043082ENSMUST00000122902ENSMUST00000143771ENSMUST00000156082
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006396 ENSDART00000007237 N/A N/A N/A 23.877±5.58 N/A N/A 0.072±0.03 0.105±0.03 N/A N/A N/A N/A N/A N/A
ENSDART00000109195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000110370 N/A N/A N/A N/A N/A N/A N/A 0.332±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000122041 N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000078745 ENSDART00000108928 N/A N/A N/A 6.088±0.00 N/A N/A 3.914±0.58 0.540±0.00 0.616±0.00 N/A 1.060±0.00 N/A N/A N/A
ENSDART00000135165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000155349 N/A N/A N/A N/A N/A N/A 1.571±0.00 0.870±0.00 0.262±0.00 N/A 0.797±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020598 ENSMUST00000020939 0.262±0.00 0.353±0.00 N/A 12.616±2.14 0.141±0.07 0.070±0.03 0.029±0.00 0.203±0.03 0.010±0.00 N/A N/A N/A N/A 0.040±0.00
ENSMUST00000110748 0.124±0.03 0.100±0.05 0.033±0.01 2.910±0.08 0.121±0.05 0.076±0.03 0.023±0.01 0.225±0.12 0.015±0.01 1.083±0.63 0.040±0.01 2.912±2.15 0.687±0.68 0.113±0.04
ENSMUSG00000036257 ENSMUST00000043082 19.119±5.28 6.135±2.42 16.839±0.20 15.943±3.04 12.025±5.08 4.657±1.30 15.090±2.83 12.169±2.97 11.343±4.49 8.737±1.44 26.921±2.79 9.343±4.32 13.173±5.03 10.689±3.03
ENSMUST00000122902 N/A N/A N/A 6.710±0.00 N/A N/A N/A N/A N/A N/A N/A 7.113±0.00 3.957±0.00 1.614±0.00
ENSMUST00000125757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143771 N/A N/A N/A 3.826±0.00 N/A N/A N/A N/A N/A N/A 3.824±0.00 6.140±0.24 5.646±0.00 N/A
ENSMUST00000156082 13.536±1.40 9.030±0.80 N/A N/A 12.186±2.00 4.276±0.97 N/A 7.463±0.29 7.149±0.65 8.177±1.38 N/A 8.484±2.44 N/A N/A

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