C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | synaptogyrin 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143852  |
Syngr2-002 |
ENSMUSG00000048277 |
10090 | + |
11:117812258-117813118  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007YS | CIL_0007YS_0002 | VISTA | 11:117565410-118167678 |
| CIL_0004UI | CIL_0004UI_0002 | CGP | 11:117797660-117814283 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006605 | ISA | protein targeting |
| GO:0008021 | IDA | synaptic vesicle |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000225777
|
SYNGR2-001 | protein_coding | Homo_sapiens | 0 | 361 |
|
ENST00000569699
|
CTD-2022H16.3-001 | processed_pseudogene | Homo_sapiens | 0 | 342 |
|
ENST00000585591
|
SYNGR2-009 | protein_coding | Homo_sapiens | 0 | 361 |
|
ENST00000588282
|
SYNGR2-003 | protein_coding | Homo_sapiens | 0 | 361 |
|
ENST00000589168
|
SYNGR2-004 | protein_coding | Homo_sapiens | 0 | 254 |
|
ENST00000589183
|
SYNGR2-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 261 |
|
ENST00000589711
|
SYNGR2-002 | protein_coding | Homo_sapiens | 8e-22 | 110 |
|
ENST00000590201
|
SYNGR2-006 | protein_coding | Homo_sapiens | 0 | 363 |
|
ENST00000591770
|
SYNGR2-008 | retained_intron | Homo_sapiens | 0 | 255 |
|
ENST00000592456
|
SYNGR2-005 | processed_transcript | Homo_sapiens | 0 | 263 |
